Professor Susan Holmes, Stanford Statistics Department, has posted course materials related to several courses at the interface of statistics and bioinformatics. Links to these are at http://www-stat.stanford.edu/~susan/courses/. See especially Stat 227 and Stat 366.
Professors Chris Burge, Amy Keating, and Michael Yaffe at MIT have made available their course materials for ”Foundations of Computational and Systems Biology” through MIT's OpenCourseWare site.